STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M4CII3_BRARPUncharacterized protein. (748 aa)    
Predicted Functional Partners:
M4DU95_BRARP
SPX domain-containing protein.
  
   
 0.481
M4CYI0_BRARP
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
      
 0.456
M4D5S3_BRARP
Inos-1-P_synth domain-containing protein.
      
 0.456
M4E2C5_BRARP
MFS domain-containing protein.
      
 0.455
M4DZC7_BRARP
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 
 0.448
M4ERE4_BRARP
STAS domain-containing protein.
      
 0.441
M4C8L1_BRARP
SPX domain-containing protein.
      
 0.440
M4D1U7_BRARP
SCP domain-containing protein; Belongs to the CRISP family.
      
 0.410
M4DBQ9_BRARP
SCP domain-containing protein; Belongs to the CRISP family.
      
 0.410
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.