STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M4CLZ9_BRARPS-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP. (373 aa)    
Predicted Functional Partners:
M4CA61_BRARP
Uncharacterized protein.
  
 0.839
M4CD35_BRARP
Uncharacterized protein.
  
 0.839
M4CQE0_BRARP
Uncharacterized protein.
  
 0.839
M4CQU8_BRARP
Uncharacterized protein.
  
 0.839
M4E4E2_BRARP
Uncharacterized protein.
  
 0.839
M4CDR8_BRARP
Uncharacterized protein.
  
 0.759
M4ENH3_BRARP
Uncharacterized protein.
  
 
 0.747
M4F9A7_BRARP
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.
  
 
 0.747
M4DBZ0_BRARP
Adenosylhomocysteinase.
  
 
 0.720
M4DER2_BRARP
Adenosylhomocysteinase.
  
 
 0.720
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai
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