STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M4CRT0_BRARPUncharacterized protein. (547 aa)    
Predicted Functional Partners:
M4EX96_BRARP
Uncharacterized protein.
   
 
0.954
M4E111_BRARP
FAD-binding PCMH-type domain-containing protein.
      
 0.751
M4C7I7_BRARP
Elf4 domain-containing protein.
      
 0.699
M4CLA4_BRARP
Elf4 domain-containing protein.
      
 0.691
M4DKK5_BRARP
Elf4 domain-containing protein.
      
 0.691
M4CJU0_BRARP
Hexosyltransferase; Belongs to the glycosyltransferase 8 family.
      
 0.665
M4DXZ2_BRARP
Hexosyltransferase; Belongs to the glycosyltransferase 8 family.
      
 0.612
M4FGX8_BRARP
Uncharacterized protein.
  
   
 0.563
M4EP48_BRARP
CRY2b.
      
 0.543
M4EFX7_BRARP
Uncharacterized protein.
      
 0.542
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.