M4CTU8_BRARP protein (Brassica rapa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:

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[Homology]

Score

M4CTU8_BRARP

Uncharacterized protein. (110 aa)

Predicted Functional Partners:

M4DZS0_BRARP

0.495

M4ELK3_BRARP

0.495

M4FAL8_BRARP

0.495

M4D840_BRARP

0.489

M4CY02_BRARP

0.456

M4F6U5_BRARP

0.456

M4CAJ5_BRARP

0.426

M4DLA5_BRARP

0.426

M4E2N3_BRARP

0.426

M4ELE2_BRARP

0.426

Your Current Organism:

Brassica rapa

NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai

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structured XML interaction data, according to the 'PSI-MI' data standard

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... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M4CAJ5_BRARP	M4CTU8_BRARP	M4CAJ5	M4CTU8	Uncharacterized protein.	Uncharacterized protein.	0.426
M4CAJ5_BRARP	M4D840_BRARP	M4CAJ5	M4D840	Uncharacterized protein.	Uncharacterized protein.	0.497
M4CAJ5_BRARP	M4DLA5_BRARP	M4CAJ5	M4DLA5	Uncharacterized protein.	Uncharacterized protein.	0.456
M4CAJ5_BRARP	M4DZS0_BRARP	M4CAJ5	M4DZS0	Uncharacterized protein.	Uncharacterized protein.	0.520
M4CAJ5_BRARP	M4E2N3_BRARP	M4CAJ5	M4E2N3	Uncharacterized protein.	Uncharacterized protein.	0.456
M4CAJ5_BRARP	M4FAL8_BRARP	M4CAJ5	M4FAL8	Uncharacterized protein.	Uncharacterized protein.	0.517
M4CTU8_BRARP	M4CAJ5_BRARP	M4CTU8	M4CAJ5	Uncharacterized protein.	Uncharacterized protein.	0.426
M4CTU8_BRARP	M4CY02_BRARP	M4CTU8	M4CY02	Uncharacterized protein.	Uncharacterized protein.	0.456
M4CTU8_BRARP	M4D840_BRARP	M4CTU8	M4D840	Uncharacterized protein.	Uncharacterized protein.	0.489
M4CTU8_BRARP	M4DLA5_BRARP	M4CTU8	M4DLA5	Uncharacterized protein.	Uncharacterized protein.	0.426
M4CTU8_BRARP	M4DZS0_BRARP	M4CTU8	M4DZS0	Uncharacterized protein.	Uncharacterized protein.	0.495
M4CTU8_BRARP	M4E2N3_BRARP	M4CTU8	M4E2N3	Uncharacterized protein.	Uncharacterized protein.	0.426
M4CTU8_BRARP	M4ELE2_BRARP	M4CTU8	M4ELE2	Uncharacterized protein.	Uncharacterized protein.	0.426
M4CTU8_BRARP	M4ELK3_BRARP	M4CTU8	M4ELK3	Uncharacterized protein.	Uncharacterized protein.	0.495
M4CTU8_BRARP	M4F6U5_BRARP	M4CTU8	M4F6U5	Uncharacterized protein.	Uncharacterized protein.	0.456
M4CTU8_BRARP	M4FAL8_BRARP	M4CTU8	M4FAL8	Uncharacterized protein.	Uncharacterized protein.	0.495
M4CY02_BRARP	M4CTU8_BRARP	M4CY02	M4CTU8	Uncharacterized protein.	Uncharacterized protein.	0.456
M4CY02_BRARP	M4ELK3_BRARP	M4CY02	M4ELK3	Uncharacterized protein.	Uncharacterized protein.	0.574
M4CY02_BRARP	M4F6U5_BRARP	M4CY02	M4F6U5	Uncharacterized protein.	Uncharacterized protein.	0.598
M4D840_BRARP	M4CAJ5_BRARP	M4D840	M4CAJ5	Uncharacterized protein.	Uncharacterized protein.	0.497

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