STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M4CW92_BRARPUncharacterized protein. (125 aa)    
Predicted Functional Partners:
M4E5F2_BRARP
SCP domain-containing protein; Belongs to the CRISP family.
      
 0.570
M4EJE3_BRARP
Uncharacterized protein.
      
 0.552
M4ESE3_BRARP
Uncharacterized protein.
  
     0.539
M4FJ79_BRARP
Uncharacterized protein.
  
     0.532
M4CZ57_BRARP
Uncharacterized protein.
  
     0.522
M4EAV9_BRARP
Uncharacterized protein.
  
     0.514
M4DHY2_BRARP
Uncharacterized protein.
  
     0.511
M4CI75_BRARP
Uncharacterized protein.
  
     0.510
M4EQF4_BRARP
Uncharacterized protein.
  
     0.506
M4EVC1_BRARP
Uncharacterized protein.
  
     0.503
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai
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