STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M4CWH4_BRARPUncharacterized protein. (212 aa)    
Predicted Functional Partners:
M4FFT6_BRARP
Uncharacterized protein.
  
     0.507
M4CCE2_BRARP
Uncharacterized protein.
  
     0.504
M4F746_BRARP
Uncharacterized protein.
  
     0.502
M4FF37_BRARP
Uncharacterized protein.
  
     0.479
M4E2Q3_BRARP
Uncharacterized protein.
  
     0.466
M4CZ69_BRARP
Apple domain-containing protein.
  
     0.465
M4ESE3_BRARP
Uncharacterized protein.
  
     0.460
M4F101_BRARP
FAS1 domain-containing protein.
  
     0.459
M4ERZ8_BRARP
Lectin_legB domain-containing protein; Belongs to the leguminous lectin family.
  
     0.454
M4E9N5_BRARP
DDA1 domain-containing protein.
  
     0.450
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.