STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M4CX24_BRARPANK_REP_REGION domain-containing protein. (749 aa)    
Predicted Functional Partners:
M4F115_BRARP
ANK_REP_REGION domain-containing protein.
  
   
 0.673
M4FC98_BRARP
ANK_REP_REGION domain-containing protein.
  
   
 0.671
M4D916_BRARP
ANK_REP_REGION domain-containing protein.
  
   
 0.637
M4CAS5_BRARP
ANK_REP_REGION domain-containing protein.
  
   
 0.630
M4E1K6_BRARP
Uncharacterized protein.
  
   
 0.627
M4ETA7_BRARP
Uncharacterized protein.
  
  
 0.604
M4DVN8_BRARP
ACB domain-containing protein.
    
 0.558
M4EBZ8_BRARP
Uncharacterized protein.
  
   
 0.556
M4C9W1_BRARP
ANK_REP_REGION domain-containing protein.
  
   
 0.555
M4DMH5_BRARP
ANK_REP_REGION domain-containing protein.
  
   
 0.546
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.