STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M4D6X9_BRARPCatalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. (492 aa)    
Predicted Functional Partners:
M4CE57_BRARP
MaoC-like domain-containing protein.
   
 0.745
M4CR26_BRARP
MaoC-like domain-containing protein.
   
 0.745
M4DH05_BRARP
MaoC-like domain-containing protein.
   
 0.745
M4DBX3_BRARP
Uncharacterized protein; Belongs to the TPP enzyme family.
   
 0.743
M4CBF6_BRARP
FMN hydroxy acid dehydrogenase domain-containing protein.
   
 
 0.733
M4CBH0_BRARP
FMN hydroxy acid dehydrogenase domain-containing protein.
   
 
 0.733
M4D7Z2_BRARP
FMN hydroxy acid dehydrogenase domain-containing protein.
   
 
 0.733
M4D9Y9_BRARP
FMN hydroxy acid dehydrogenase domain-containing protein.
   
 
 0.733
M4DYD7_BRARP
FMN hydroxy acid dehydrogenase domain-containing protein.
   
 
 0.733
M4DYD9_BRARP
FMN hydroxy acid dehydrogenase domain-containing protein.
   
 
 0.733
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai
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