STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M4D9K7_BRARPTerpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (767 aa)    
Predicted Functional Partners:
M4CPS2_BRARP
Methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Erg6/SMT family.
   
 0.964
M4EGE9_BRARP
SE domain-containing protein.
  
 
 0.941
M4DJZ4_BRARP
Uncharacterized protein.
  
 0.931
M4EN28_BRARP
SE domain-containing protein.
  
 
 0.919
M4DTJ6_BRARP
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
 0.916
M4DY94_BRARP
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
 0.916
M4CZU0_BRARP
SE domain-containing protein.
  
 
 0.912
M4EQP7_BRARP
SE domain-containing protein.
  
 
 0.912
M4D5M6_BRARP
SE domain-containing protein.
  
 
 0.911
M4EKS6_BRARP
SE domain-containing protein.
  
 
 0.911
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.