Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
M4DBX3_BRARP | M4DDQ4_BRARP | M4DBX3 | M4DDQ4 | Uncharacterized protein; Belongs to the TPP enzyme family. | Uncharacterized protein; Belongs to the peptidase M16 family. | 0.504 |
M4DBX3_BRARP | M4DIL9_BRARP | M4DBX3 | M4DIL9 | Uncharacterized protein; Belongs to the TPP enzyme family. | Ribosomal_S27 domain-containing protein. | 0.677 |
M4DBX3_BRARP | M4E2Z1_BRARP | M4DBX3 | M4E2Z1 | Uncharacterized protein; Belongs to the TPP enzyme family. | Uncharacterized protein. | 0.677 |
M4DBX3_BRARP | M4E743_BRARP | M4DBX3 | M4E743 | Uncharacterized protein; Belongs to the TPP enzyme family. | Ribosomal_S27 domain-containing protein. | 0.677 |
M4DBX3_BRARP | M4EM81_BRARP | M4DBX3 | M4EM81 | Uncharacterized protein; Belongs to the TPP enzyme family. | Uncharacterized protein. | 0.677 |
M4DBX3_BRARP | M4F5R9_BRARP | M4DBX3 | M4F5R9 | Uncharacterized protein; Belongs to the TPP enzyme family. | Uncharacterized protein. | 0.677 |
M4DDQ4_BRARP | M4DBX3_BRARP | M4DDQ4 | M4DBX3 | Uncharacterized protein; Belongs to the peptidase M16 family. | Uncharacterized protein; Belongs to the TPP enzyme family. | 0.504 |
M4DDQ4_BRARP | M4DIL9_BRARP | M4DDQ4 | M4DIL9 | Uncharacterized protein; Belongs to the peptidase M16 family. | Ribosomal_S27 domain-containing protein. | 0.599 |
M4DDQ4_BRARP | M4DPB3_BRARP | M4DDQ4 | M4DPB3 | Uncharacterized protein; Belongs to the peptidase M16 family. | Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. | 0.527 |
M4DDQ4_BRARP | M4E065_BRARP | M4DDQ4 | M4E065 | Uncharacterized protein; Belongs to the peptidase M16 family. | Uncharacterized protein; Belongs to the peptidase M16 family. | 0.493 |
M4DDQ4_BRARP | M4E2Z1_BRARP | M4DDQ4 | M4E2Z1 | Uncharacterized protein; Belongs to the peptidase M16 family. | Uncharacterized protein. | 0.599 |
M4DDQ4_BRARP | M4E743_BRARP | M4DDQ4 | M4E743 | Uncharacterized protein; Belongs to the peptidase M16 family. | Ribosomal_S27 domain-containing protein. | 0.599 |
M4DDQ4_BRARP | M4EM81_BRARP | M4DDQ4 | M4EM81 | Uncharacterized protein; Belongs to the peptidase M16 family. | Uncharacterized protein. | 0.599 |
M4DDQ4_BRARP | M4EX84_BRARP | M4DDQ4 | M4EX84 | Uncharacterized protein; Belongs to the peptidase M16 family. | Ubiquitin-like domain-containing protein. | 0.680 |
M4DDQ4_BRARP | M4F5R9_BRARP | M4DDQ4 | M4F5R9 | Uncharacterized protein; Belongs to the peptidase M16 family. | Uncharacterized protein. | 0.599 |
M4DDQ4_BRARP | RL40_BRARP | M4DDQ4 | P51423 | Uncharacterized protein; Belongs to the peptidase M16 family. | Ubiquitin-60S ribosomal protein L40; [Ubiquitin]: exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-48-linked is invol [...] | 0.680 |
M4DIL9_BRARP | M4DBX3_BRARP | M4DIL9 | M4DBX3 | Ribosomal_S27 domain-containing protein. | Uncharacterized protein; Belongs to the TPP enzyme family. | 0.677 |
M4DIL9_BRARP | M4DDQ4_BRARP | M4DIL9 | M4DDQ4 | Ribosomal_S27 domain-containing protein. | Uncharacterized protein; Belongs to the peptidase M16 family. | 0.599 |
M4DIL9_BRARP | M4EX84_BRARP | M4DIL9 | M4EX84 | Ribosomal_S27 domain-containing protein. | Ubiquitin-like domain-containing protein. | 0.996 |
M4DIL9_BRARP | RL40_BRARP | M4DIL9 | P51423 | Ribosomal_S27 domain-containing protein. | Ubiquitin-60S ribosomal protein L40; [Ubiquitin]: exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-48-linked is invol [...] | 0.996 |
page 1 of 3