STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M4DRL1_BRARPUncharacterized protein. (461 aa)    
Predicted Functional Partners:
HY5
BZIP domain-containing protein.
    
 
 0.568
M4E3G5_BRARP
BZIP domain-containing protein.
    
 
 0.568
M4F1J5_BRARP
Uncharacterized protein; Belongs to the cytochrome P450 family.
      
 0.489
M4CBU1_BRARP
BZIP domain-containing protein.
    
 
 0.486
M4DXL2_BRARP
BZIP domain-containing protein.
    
 
 0.486
M4E0C8_BRARP
BZIP domain-containing protein.
    
 
 0.486
M4C924_BRARP
Uncharacterized protein.
      
 0.482
M4EF60_BRARP
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 
 0.481
M4CMV3_BRARP
Uncharacterized protein.
    
 
 0.479
M4DZ71_BRARP
Uncharacterized protein.
    
 
 0.479
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai
Server load: low (18%) [HD]