STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M4DUS7_BRARPUncharacterized protein. (884 aa)    
Predicted Functional Partners:
M4EBC7_BRARP
Cyclic nucleotide-binding domain-containing protein.
   
  
 0.586
M4CWY6_BRARP
Cyclic nucleotide-binding domain-containing protein.
   
  
 0.585
M4D6V0_BRARP
Uncharacterized protein.
    
 0.531
M4DJ00_BRARP
Uncharacterized protein.
    
 0.531
M4ETR0_BRARP
Uncharacterized protein.
      
 0.459
M4CU91_BRARP
Uncharacterized protein.
   
  
 0.438
M4C9K5_BRARP
Uncharacterized protein.
      
 0.437
M4CZ52_BRARP
SRP54 domain-containing protein.
   
  
 0.408
M4EJ44_BRARP
SRP54 domain-containing protein.
   
  
 0.408
M4ESX4_BRARP
Cellulose synthase; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily.
   
 
 0.407
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.