STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M4DV02_BRARPUncharacterized protein; Belongs to the cytochrome P450 family. (101 aa)    
Predicted Functional Partners:
M4EH78_BRARP
Lipase_GDSL domain-containing protein.
   
 
 0.709
M4DSH1_BRARP
Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols.
   
  
 0.594
M4DSD7_BRARP
Uncharacterized protein.
      
 0.576
M4CY65_BRARP
PlsC domain-containing protein.
   
  
 0.521
M4F374_BRARP
Uncharacterized protein.
  
 0.518
M4DFM3_BRARP
3-ketoacyl-CoA synthase.
    
 
 0.507
M4DL12_BRARP
ABC transporter domain-containing protein.
   
  
 0.506
M4F0N9_BRARP
3-ketoacyl-CoA synthase.
    
 
 0.500
M4DVX0_BRARP
3-ketoacyl-CoA synthase.
    
 
 0.497
M4DSD8_BRARP
Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols.
   
  
 0.489
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.