STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M4DY42_BRARPNAD(P)-bd_dom domain-containing protein. (257 aa)    
Predicted Functional Partners:
M4FG88_BRARP
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
  0.629
M4FH37_BRARP
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
  0.629
M4CZ60_BRARP
Uncharacterized protein.
   
  0.627
M4EJ49_BRARP
Uncharacterized protein.
   
  0.627
M4CP86_BRARP
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
   
  0.613
M4DFM6_BRARP
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
   
  0.613
M4F462_BRARP
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
   
  0.613
M4D5W4_BRARP
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
  0.588
M4ENC2_BRARP
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
  0.588
M4EQX9_BRARP
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
  0.588
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai
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