STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M4E1E7_BRARPUncharacterized protein. (291 aa)    
Predicted Functional Partners:
M4D0I0_BRARP
Nop domain-containing protein.
   
 0.991
M4DVQ7_BRARP
Nop domain-containing protein.
   
 0.991
M4F4V7_BRARP
Nop domain-containing protein.
   
 0.991
M4D264_BRARP
Uncharacterized protein.
   
 0.989
M4CSV0_BRARP
Uncharacterized protein.
   
 0.988
M4CAH4_BRARP
BP28CT domain-containing protein.
   
 0.986
M4CNU3_BRARP
WD_REPEATS_REGION domain-containing protein.
   
 0.986
M4ELB7_BRARP
BP28CT domain-containing protein.
   
 0.986
M4C9D5_BRARP
WD_REPEATS_REGION domain-containing protein.
   
 0.985
M4DCM0_BRARP
Uncharacterized protein.
   
 0.985
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.