STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M4E2Z3_BRARPUncharacterized protein. (391 aa)    
Predicted Functional Partners:
M4ES52_BRARP
Phytocyanin domain-containing protein.
  
   
 0.559
M4EPL0_BRARP
Phytocyanin domain-containing protein.
  
   
 0.541
M4ERH4_BRARP
LEA_2 domain-containing protein.
  
     0.522
M4DJK4_BRARP
Uncharacterized protein.
  
     0.509
M4CAJ4_BRARP
WD_REPEATS_REGION domain-containing protein.
  
     0.508
M4FFG9_BRARP
Uncharacterized protein.
  
     0.501
M4DKK2_BRARP
Protein yippee-like; Belongs to the yippee family.
      
 0.495
M4EBN5_BRARP
Uncharacterized protein.
  
     0.495
M4E307_BRARP
BHLH domain-containing protein.
  
     0.489
M4DM88_BRARP
Uncharacterized protein.
  
     0.487
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.