STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M4E5R5_BRARPUncharacterized protein. (366 aa)    
Predicted Functional Partners:
M4DIP4_BRARP
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
    
 
 0.585
M4F577_BRARP
Fe2OG dioxygenase domain-containing protein.
      
 0.574
M4D0E3_BRARP
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 0.566
M4DVM9_BRARP
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 0.566
M4CMV5_BRARP
Uncharacterized protein.
      
 0.541
M4DZ70_BRARP
Uncharacterized protein.
      
 0.541
M4FCB9_BRARP
LRRNT_2 domain-containing protein.
  
     0.517
M4EHZ9_BRARP
Uncharacterized protein.
  
 
  0.516
M4CB80_BRARP
LRRNT_2 domain-containing protein.
  
     0.515
M4E4V1_BRARP
LRRNT_2 domain-containing protein.
  
 
  0.515
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.