STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M4E7B7_BRARPBHLH domain-containing protein. (95 aa)    
Predicted Functional Partners:
M4E099_BRARP
Uncharacterized protein.
  
   
 0.627
M4DXH3_BRARP
Uncharacterized protein.
  
   
 0.621
M4CAD9_BRARP
Uncharacterized protein.
  
 
 
 0.598
M4ELC2_BRARP
BHLH domain-containing protein.
  
   
 0.581
M4FGM5_BRARP
Uncharacterized protein.
  
 
 
 0.544
M4CH75_BRARP
Uncharacterized protein.
  
     0.543
M4ENT6_BRARP
Uncharacterized protein.
  
     0.543
M4DC53_BRARP
Uncharacterized protein.
  
     0.542
M4DM81_BRARP
Uncharacterized protein.
  
     0.542
M4E2K4_BRARP
Uncharacterized protein.
  
     0.542
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai
Server load: low (22%) [HD]