STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M4EAA7_BRARPFLZ-type domain-containing protein. (232 aa)    
Predicted Functional Partners:
M4CEM6_BRARP
OVATE domain-containing protein.
  
     0.489
M4DRQ1_BRARP
CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.
  
     0.487
M4DBJ8_BRARP
CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.
  
     0.486
M4E6N0_BRARP
Uncharacterized protein.
  
     0.474
M4D1X6_BRARP
CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.
  
     0.466
M4FFC1_BRARP
Uncharacterized protein.
  
     0.466
M4FFT5_BRARP
Uncharacterized protein.
  
     0.462
M4FH60_BRARP
FLZ-type domain-containing protein.
      
 0.459
M4DBR4_BRARP
CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.
  
     0.455
M4EXK0_BRARP
Uncharacterized protein; Belongs to the endosulfine family.
  
     0.455
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.