STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M4EBL7_BRARPBet_v_1 domain-containing protein. (153 aa)    
Predicted Functional Partners:
M4CAU1_BRARP
Uncharacterized protein; Belongs to the glycosyl hydrolase 1 family.
      
 0.750
M4EZ17_BRARP
Uncharacterized protein; Belongs to the glycosyl hydrolase 1 family.
      
 0.693
M4DMD9_BRARP
Arginine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily.
      
 0.679
M4D2S9_BRARP
Tr-type G domain-containing protein.
      
 0.642
M4DVJ8_BRARP
Uncharacterized protein.
      
 0.642
M4FDJ6_BRARP
Uncharacterized protein.
      
 0.555
M4CYD2_BRARP
Arginine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily.
      
 0.552
M4D1W7_BRARP
BHLH domain-containing protein.
  
     0.514
M4CRQ8_BRARP
Uncharacterized protein.
  
     0.512
M4ESF8_BRARP
Uncharacterized protein.
  
     0.504
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.