STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M4EKI2_BRARPUncharacterized protein. (1087 aa)    
Predicted Functional Partners:
M4CH46_BRARP
Uncharacterized protein.
      
 0.456
M4CJW6_BRARP
Metallophos domain-containing protein.
      
 0.455
M4EGL2_BRARP
Uncharacterized protein.
      
 0.443
M4CD28_BRARP
Uncharacterized protein; Belongs to the CTL (choline transporter-like) family.
      
 0.442
M4D2R4_BRARP
Uncharacterized protein.
      
 0.433
M4D2R6_BRARP
Uncharacterized protein.
      
 0.433
M4DEG0_BRARP
Uncharacterized protein.
      
 0.433
M4EIB5_BRARP
FAD-binding PCMH-type domain-containing protein; Belongs to the oxygen-dependent FAD-linked oxidoreductase family.
      
 0.426
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.