STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M4EPA9_BRARPzf-C3Hc3H domain-containing protein. (225 aa)    
Predicted Functional Partners:
M4E257_BRARP
zf-C3Hc3H domain-containing protein.
  
  
 
0.547
M4DG35_BRARP
zf-C3Hc3H domain-containing protein.
  
  
 
0.545
M4CDX5_BRARP
RuvB-like helicase; Belongs to the RuvB family.
     
  0.540
M4CG46_BRARP
FHA domain-containing protein.
     
  0.540
M4CHE3_BRARP
Enhancer of polycomb-like protein.
     
  0.540
M4CJT7_BRARP
SANT domain-containing protein.
     
  0.540
M4CNM4_BRARP
Enhancer of polycomb-like protein.
     
  0.540
M4CQY0_BRARP
RuvB-like helicase; Belongs to the RuvB family.
     
  0.540
M4CVZ4_BRARP
Enhancer of polycomb-like protein.
     
  0.540
M4D5A2_BRARP
Non-specific serine/threonine protein kinase; Belongs to the PI3/PI4-kinase family.
     
  0.540
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.