STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M4EQA2_BRARPAbhydrolase_2 domain-containing protein. (255 aa)    
Predicted Functional Partners:
M4CKY3_BRARP
Lipase_3 domain-containing protein.
     
  0.900
M4D7S1_BRARP
Uncharacterized protein.
     
 0.900
M4DAC0_BRARP
Uncharacterized protein.
     
 0.900
M4E6B2_BRARP
WD_REPEATS_REGION domain-containing protein.
    
 
 0.736
M4E9R6_BRARP
GP-PDE domain-containing protein.
     
 0.726
M4EFB9_BRARP
GP-PDE domain-containing protein.
     
 0.726
M4EI70_BRARP
GP-PDE domain-containing protein.
     
 0.726
M4F4G7_BRARP
GP-PDE domain-containing protein.
     
 0.726
M4FHX5_BRARP
GP-PDE domain-containing protein.
     
 0.726
M4CHY0_BRARP
GP-PDE domain-containing protein.
     
 0.715
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.