STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M4ESB2_BRARPGlutamyl-tRNA reductase; Belongs to the glutamyl-tRNA reductase family. (527 aa)    
Predicted Functional Partners:
M4F436_BRARP
Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
  
 0.981
M4FC30_BRARP
Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
  
 0.981
M4E658_BRARP
tRNA-synt_1c domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
     
 0.892
M4F785_BRARP
Uncharacterized protein; Belongs to the ALAD family.
 
  
 0.884
M4DIE3_BRARP
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
 
  
 0.882
M4E543_BRARP
DUF2470 domain-containing protein.
    
 
 0.872
M4ER38_BRARP
DUF2470 domain-containing protein.
    
 
 0.872
M4DVI5_BRARP
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
     
 0.867
M4ECA1_BRARP
Uncharacterized protein.
     
 0.867
M4F676_BRARP
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
     
 0.867
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai
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