STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M4ETS3_BRARPAldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (482 aa)    
Predicted Functional Partners:
M4CPS1_BRARP
Uncharacterized protein.
    
 0.944
M4ENB6_BRARP
Acetyl-coenzyme A synthetase.
  
 0.937
M4F803_BRARP
Aldedh domain-containing protein.
   
0.932
M4F8P5_BRARP
Uncharacterized protein.
     
 0.920
M4DVC5_BRARP
Uncharacterized protein.
  
 0.919
M4D136_BRARP
ADH_N domain-containing protein.
  
 0.902
M4E3D9_BRARP
Uncharacterized protein.
  
 0.902
M4EQY5_BRARP
Uncharacterized protein.
  
 0.902
M4CAJ1_BRARP
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
  
 
 0.874
M4E2M4_BRARP
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 
 0.867
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.