STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M4F0F1_BRARPGlutaredoxin domain-containing protein. (144 aa)    
Predicted Functional Partners:
M4DSD2_BRARP
LMWPc domain-containing protein.
   
 
 0.559
M4C9U4_BRARP
Uncharacterized protein.
  
 0.472
M4CCV6_BRARP
Uncharacterized protein.
  
 0.472
M4CL60_BRARP
DUF4378 domain-containing protein.
  
 0.472
M4CTQ5_BRARP
DUF4378 domain-containing protein.
  
 0.472
M4CYH9_BRARP
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
  
 0.472
M4D2I9_BRARP
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
  
 0.472
M4D2J0_BRARP
Uncharacterized protein.
  
 0.472
M4D5V7_BRARP
Uncharacterized protein.
  
 0.472
M4DD72_BRARP
Uncharacterized protein.
  
 0.472
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.