STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M4F2G3_BRARPANK_REP_REGION domain-containing protein. (81 aa)    
Predicted Functional Partners:
M4CLF6_BRARP
Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.489
M4ESM1_BRARP
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.489
M4F7Y4_BRARP
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.489
M4C9G7_BRARP
Serine/threonine-protein phosphatase.
    
 0.445
M4DPS9_BRARP
Serine/threonine-protein phosphatase.
    
 0.445
M4DQ35_BRARP
Serine/threonine-protein phosphatase.
    
 0.445
M4ENV8_BRARP
Serine/threonine-protein phosphatase.
    
 0.445
M4EPK4_BRARP
Serine/threonine-protein phosphatase.
    
 0.445
M4ES48_BRARP
Serine/threonine-protein phosphatase.
    
 0.445
M4FH58_BRARP
Uncharacterized protein.
    
 0.428
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai
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