STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M4F7C1_BRARPSCP domain-containing protein; Belongs to the CRISP family. (163 aa)    
Predicted Functional Partners:
M4EWS6_BRARP
Aminotran_1_2 domain-containing protein.
      
 0.642
M4D8F7_BRARP
FAD_binding_3 domain-containing protein.
      
 0.602
M4FAF4_BRARP
FAD_binding_3 domain-containing protein.
      
 0.602
ETR1
Ethylene receptor; May act early in the ethylene signal transduction pathway, possibly as an ethylene receptor, or as a regulator of the pathway.
      
 0.566
M4EAK7_BRARP
Uncharacterized protein.
     
 0.516
WRKY29
WRKY domain-containing protein.
      
 0.489
M4C7Q0_BRARP
Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.
      
 0.486
M4DKA1_BRARP
Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.
      
 0.486
M4DB14_BRARP
Uncharacterized protein.
   
  
 0.483
M4CVJ3_BRARP
Uncharacterized protein.
     
 0.482
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai
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