STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M4F803_BRARPAldedh domain-containing protein. (527 aa)    
Predicted Functional Partners:
M4DQA1_BRARP
Uncharacterized protein.
   
 0.968
M4DWI1_BRARP
3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family.
   
 0.966
M4CUS2_BRARP
Uncharacterized protein.
   
 0.964
M4CAJ1_BRARP
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
   
 
 0.962
M4DW16_BRARP
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.943
M4F8T9_BRARP
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.943
M4CMT4_BRARP
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.942
M4DVX9_BRARP
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.942
M4DZ82_BRARP
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.942
M4E2C7_BRARP
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.942
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.