STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2Y6E7_CIOSAPlsC domain-containing protein. (375 aa)    
Predicted Functional Partners:
H2YG28_CIOSA
Uncharacterized protein; Belongs to the membrane-bound acyltransferase family.
   
 0.848
H2YHE4_CIOSA
Tafazzin family protein; Belongs to the taffazin family.
   
 
 0.832
H2YW95_CIOSA
PlsC domain-containing protein.
  
 
 0.825
H2YD90_CIOSA
Uncharacterized protein.
  
 
 0.812
H2YP80_CIOSA
Glycerol-3-phosphate dehydrogenase [NAD(+)].
    
 0.812
H2Z9R4_CIOSA
Uncharacterized protein.
  
 0.810
H2ZJI4_CIOSA
AB hydrolase-1 domain-containing protein.
  
 0.807
H2ZEB5_CIOSA
DAGKc domain-containing protein.
     
 0.806
H2YVB9_CIOSA
PlsC domain-containing protein.
     
 0.800
H2YYH8_CIOSA
Uncharacterized protein.
  
 
 0.800
Your Current Organism:
Ciona savignyi
NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.