STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2Y6U5_CIOSAPH domain-containing protein. (213 aa)    
Predicted Functional Partners:
H2YC62_CIOSA
Uncharacterized protein.
    
 0.958
H2ZD31_CIOSA
Histone H2A; Belongs to the histone H2A family.
   
 0.912
H2YEI0_CIOSA
Ubiquitin-like domain-containing protein.
    
 0.906
H2YAB2_CIOSA
Ubiquitin-like domain-containing protein.
   
 0.903
H2YRA0_CIOSA
Uncharacterized protein.
    
 
 0.902
H2YEA9_CIOSA
RPOLD domain-containing protein.
    
 0.873
H2Y4I7_CIOSA
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.867
H2Z3H0_CIOSA
RNA_pol_Rpb5_C domain-containing protein.
    
  0.862
H2Y966_CIOSA
Uncharacterized protein.
   
 0.861
H2Z6R0_CIOSA
Uncharacterized protein.
   
 0.861
Your Current Organism:
Ciona savignyi
NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate
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