STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2Y6V0_CIOSATPR_REGION domain-containing protein. (295 aa)    
Predicted Functional Partners:
H2Y6U7_CIOSA
Uncharacterized protein.
 
     0.938
H2Y6U8_CIOSA
ANK_REP_REGION domain-containing protein.
 
      0.900
H2YS41_CIOSA
RHD domain-containing protein.
   
 0.780
H2Z315_CIOSA
SER_THR_PHOSPHATASE domain-containing protein.
    
 0.754
H2ZK13_CIOSA
Uncharacterized protein.
    
 0.741
H2Y9I4_CIOSA
AN1-type domain-containing protein.
   
 0.717
H2YNA5_CIOSA
IFT81_CH domain-containing protein.
    
 0.714
H2YA04_CIOSA
Uncharacterized protein.
    
 0.694
H2YAL3_CIOSA
Uncharacterized protein.
    
 0.691
H2YKM6_CIOSA
Uncharacterized protein.
    
 0.687
Your Current Organism:
Ciona savignyi
NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.