STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2Y7H3_CIOSASAM-dependent MTase TRM10-type domain-containing protein. (124 aa)    
Predicted Functional Partners:
H2YYQ6_CIOSA
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.868
H2YXP8_CIOSA
Uncharacterized protein.
   
 0.852
H2YSN6_CIOSA
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family.
   
 
 0.702
H2YEI4_CIOSA
tRNA pseudouridine synthase.
   
 
 0.604
H2YLR8_CIOSA
PseudoU_synth_1 domain-containing protein.
   
 
 0.591
H2Z0U5_CIOSA
tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A; Catalytic subunit of tRNA (adenine-N(1)-)-methyltransferase, which catalyzes the formation of N(1)-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA.
   
 
 0.537
H2YBX2_CIOSA
Uncharacterized protein.
   
  
 0.491
H2YF47_CIOSA
Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.
   
   0.481
H2YFS8_CIOSA
Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.
   
   0.481
H2ZLY0_CIOSA
tRNA (guanine(26)-N(2))-dimethyltransferase.
   
 
 0.476
Your Current Organism:
Ciona savignyi
NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.