H2Y7I2_CIOSA protein (Ciona savignyi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

H2Y7I2_CIOSA

Uncharacterized protein. (59 aa)

Predicted Functional Partners:

H2YUM0_CIOSA

0.535

H2YPX9_CIOSA

0.529

H2ZEP8_CIOSA

0.526

H2ZEN3_CIOSA

0.525

H2ZGQ6_CIOSA

0.525

H2Z6W0_CIOSA

0.523

H2ZEL5_CIOSA

0.516

H2ZEN5_CIOSA

0.516

H2Z768_CIOSA

0.515

H2ZEQ5_CIOSA

0.514

Your Current Organism:

Ciona savignyi

NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H2Y7I2_CIOSA	H2YPX9_CIOSA	ENSCSAVP00000001280	ENSCSAVP00000007387	Uncharacterized protein.	Uncharacterized protein.	0.529
H2Y7I2_CIOSA	H2YUM0_CIOSA	ENSCSAVP00000001280	ENSCSAVP00000009030	Uncharacterized protein.	Uncharacterized protein.	0.535
H2Y7I2_CIOSA	H2Z6W0_CIOSA	ENSCSAVP00000001280	ENSCSAVP00000013322	Uncharacterized protein.	Uncharacterized protein.	0.523
H2Y7I2_CIOSA	H2Z768_CIOSA	ENSCSAVP00000001280	ENSCSAVP00000013430	Uncharacterized protein.	TILa domain-containing protein.	0.515
H2Y7I2_CIOSA	H2ZEL5_CIOSA	ENSCSAVP00000001280	ENSCSAVP00000016031	Uncharacterized protein.	Uncharacterized protein.	0.516
H2Y7I2_CIOSA	H2ZEN3_CIOSA	ENSCSAVP00000001280	ENSCSAVP00000016049	Uncharacterized protein.	Uncharacterized protein.	0.525
H2Y7I2_CIOSA	H2ZEN5_CIOSA	ENSCSAVP00000001280	ENSCSAVP00000016051	Uncharacterized protein.	Uncharacterized protein.	0.516
H2Y7I2_CIOSA	H2ZEP8_CIOSA	ENSCSAVP00000001280	ENSCSAVP00000016064	Uncharacterized protein.	Uncharacterized protein.	0.526
H2Y7I2_CIOSA	H2ZEQ5_CIOSA	ENSCSAVP00000001280	ENSCSAVP00000016071	Uncharacterized protein.	Uncharacterized protein.	0.514
H2Y7I2_CIOSA	H2ZGQ6_CIOSA	ENSCSAVP00000001280	ENSCSAVP00000016772	Uncharacterized protein.	Uncharacterized protein.	0.525
H2YPX9_CIOSA	H2Y7I2_CIOSA	ENSCSAVP00000007387	ENSCSAVP00000001280	Uncharacterized protein.	Uncharacterized protein.	0.529
H2YPX9_CIOSA	H2YUM0_CIOSA	ENSCSAVP00000007387	ENSCSAVP00000009030	Uncharacterized protein.	Uncharacterized protein.	0.530
H2YPX9_CIOSA	H2Z768_CIOSA	ENSCSAVP00000007387	ENSCSAVP00000013430	Uncharacterized protein.	TILa domain-containing protein.	0.507
H2YPX9_CIOSA	H2ZEN3_CIOSA	ENSCSAVP00000007387	ENSCSAVP00000016049	Uncharacterized protein.	Uncharacterized protein.	0.542
H2YPX9_CIOSA	H2ZEP8_CIOSA	ENSCSAVP00000007387	ENSCSAVP00000016064	Uncharacterized protein.	Uncharacterized protein.	0.542
H2YUM0_CIOSA	H2Y7I2_CIOSA	ENSCSAVP00000009030	ENSCSAVP00000001280	Uncharacterized protein.	Uncharacterized protein.	0.535
H2YUM0_CIOSA	H2YPX9_CIOSA	ENSCSAVP00000009030	ENSCSAVP00000007387	Uncharacterized protein.	Uncharacterized protein.	0.530
H2YUM0_CIOSA	H2Z6W0_CIOSA	ENSCSAVP00000009030	ENSCSAVP00000013322	Uncharacterized protein.	Uncharacterized protein.	0.522
H2YUM0_CIOSA	H2Z768_CIOSA	ENSCSAVP00000009030	ENSCSAVP00000013430	Uncharacterized protein.	TILa domain-containing protein.	0.505
H2YUM0_CIOSA	H2ZEL5_CIOSA	ENSCSAVP00000009030	ENSCSAVP00000016031	Uncharacterized protein.	Uncharacterized protein.	0.518