STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2Y7I4_CIOSAUncharacterized protein. (593 aa)    
Predicted Functional Partners:
H2ZFH8_CIOSA
Uncharacterized protein.
   
 0.989
H2YB78_CIOSA
Uncharacterized protein.
   
 0.873
H2YPF9_CIOSA
Uncharacterized protein.
   
 0.873
H2ZR19_CIOSA
Uncharacterized protein.
    
 0.851
H2YR36_CIOSA
Uncharacterized protein.
    
 0.812
H2YW59_CIOSA
Uncharacterized protein.
    
 0.812
H2YWY9_CIOSA
Uncharacterized protein.
    
 0.812
H2YU53_CIOSA
MHD domain-containing protein.
    
 0.807
H2ZN12_CIOSA
Uncharacterized protein.
    
 0.780
H2ZKR4_CIOSA
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
     
 0.756
Your Current Organism:
Ciona savignyi
NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.