STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2Y7N9_CIOSAIon_trans_2 domain-containing protein. (179 aa)    
Predicted Functional Partners:
H2ZBT0_CIOSA
Uncharacterized protein; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.
  
  
0.750
H2YHW2_CIOSA
Uncharacterized protein; Belongs to the protein kinase superfamily.
     
 0.743
H2ZI67_CIOSA
Uncharacterized protein; Belongs to the protein kinase superfamily.
     
 0.743
H2YYY7_CIOSA
CaMBD domain-containing protein.
   
 
 0.698
H2YJM0_CIOSA
Ion_trans_2 domain-containing protein.
   
 
0.692
H2YHG2_CIOSA
Putative lipoyltransferase 2, mitochondrial; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. Belongs to the LipB family.
     
 0.660
H2YDQ7_CIOSA
Uncharacterized protein; Belongs to the potassium channel family.
     
 0.541
H2ZAK2_CIOSA
Uncharacterized protein; Belongs to the potassium channel family.
     
 0.541
H2ZN63_CIOSA
BTB domain-containing protein; Belongs to the potassium channel family.
   
 
 0.470
H2YG68_CIOSA
Uncharacterized protein.
     
 0.463
Your Current Organism:
Ciona savignyi
NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.