Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H2Y7R8_CIOSAPeptidase S1 domain-containing protein; Belongs to the peptidase S1 family. (341 aa)    
Predicted Functional Partners:
H2ZQ60_CIOSA
Uncharacterized protein.
    
 0.771
H2YUM4_CIOSA
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
      
 0.693
H2YBV1_CIOSA
Uncharacterized protein.
   
 
 0.656
H2YLR5_CIOSA
Peptidase_M14 domain-containing protein.
   
 
 0.656
H2Z538_CIOSA
Peptidase_M14 domain-containing protein.
   
 
 0.656
H2ZHG0_CIOSA
Uncharacterized protein.
   
 
 0.656
H2ZNP9_CIOSA
Uncharacterized protein.
   
 
 0.656
H2ZCH5_CIOSA
Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.
     
 0.650
H2YEW1_CIOSA
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.642
H2Z0H1_CIOSA
Protein kinase domain-containing protein.
    
 0.634
Your Current Organism:
Ciona savignyi
NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate
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