Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H2Y7S4_CIOSAUncharacterized protein. (134 aa)    
Predicted Functional Partners:
H2YKG8_CIOSA
Uncharacterized protein.
   
 0.999
H2YG81_CIOSA
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
   
 0.996
H2ZAA0_CIOSA
Plug_translocon domain-containing protein.
   
 0.988
H2YIU5_CIOSA
Uncharacterized protein.
   
 0.984
H2YLC8_CIOSA
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across t [...]
   
 0.972
H2ZLI7_CIOSA
Ribosomal_L19e domain-containing protein.
   
   0.950
H2YG02_CIOSA
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
    
   0.928
H2YIU9_CIOSA
Ribosomal_L2_C domain-containing protein.
    
   0.928
H2YEI0_CIOSA
Ubiquitin-like domain-containing protein.
    
   0.927
H2YPP2_CIOSA
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.
    
   0.923
Your Current Organism:
Ciona savignyi
NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate
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