STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2Y7S7_CIOSADHHA2 domain-containing protein. (306 aa)    
Predicted Functional Partners:
ATP6
ATP synthase subunit a.
  
 
 0.882
H2YZ23_CIOSA
Uncharacterized protein.
     
 0.869
H2Y672_CIOSA
ATP-synt_C domain-containing protein; Belongs to the ATPase C chain family.
    
 0.822
H2YPR5_CIOSA
Uncharacterized protein; Belongs to the V-ATPase proteolipid subunit family.
    
 0.822
H2ZE88_CIOSA
Pribosyltran domain-containing protein.
    
 0.821
H2ZEH4_CIOSA
ATP synthase subunit gamma.
    
 0.816
H2ZM25_CIOSA
ATP-synt_DE_N domain-containing protein.
    
 0.816
H2YQ11_CIOSA
Uncharacterized protein.
    
 0.803
H2YJV8_CIOSA
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
 
 0.781
H2Y4T7_CIOSA
Uncharacterized protein.
  
 
 0.780
Your Current Organism:
Ciona savignyi
NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate
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