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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2Y7W1_CIOSAMetalloendopeptidase. (161 aa)    
Predicted Functional Partners:
H2ZEW6_CIOSA
Uncharacterized protein.
 
  
  0.882
H2YCS2_CIOSA
Uncharacterized protein.
 
      0.809
H2YCT0_CIOSA
Uncharacterized protein.
 
      0.804
H2YKV1_CIOSA
Uncharacterized protein.
   
  0.538
H2Z662_CIOSA
Uncharacterized protein.
   
  0.538
H2ZK87_CIOSA
Uncharacterized protein.
 
      0.517
H2YY76_CIOSA
Uncharacterized protein; Belongs to the chordin family.
    
 
 0.472
H2YJM8_CIOSA
Uncharacterized protein.
     
 0.471
H2ZLT7_CIOSA
Uncharacterized protein; Belongs to the peptidase M24B family.
    
 0.461
H2ZJ05_CIOSA
Uncharacterized protein.
     
 0.425
Your Current Organism:
Ciona savignyi
NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate
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