STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2Y7W2_CIOSAAAA domain-containing protein; Belongs to the AAA ATPase family. (370 aa)    
Predicted Functional Partners:
H2YPX7_CIOSA
UBX domain-containing protein.
   
 0.995
H2YD37_CIOSA
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
    
 0.824
H2ZCY3_CIOSA
Peroxin-13_N domain-containing protein.
    
 0.824
H2ZHE4_CIOSA
Uncharacterized protein.
   
 0.824
H2Z4W5_CIOSA
MPN domain-containing protein.
   
 0.823
H2YMI4_CIOSA
Uncharacterized protein.
    
 0.818
H2ZD73_CIOSA
Pex14_N domain-containing protein.
    
 0.813
H2YYM0_CIOSA
Uncharacterized protein.
   
 0.805
H2ZHE1_CIOSA
Uncharacterized protein.
   
 0.803
H2Y716_CIOSA
Uncharacterized protein.
    
 0.788
Your Current Organism:
Ciona savignyi
NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.