STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCSAVP00000001427annotation not available (213 aa)    
Predicted Functional Partners:
H2ZAS5_CIOSA
5'-3' exoribonuclease 1.
    
 0.832
H2YF23_CIOSA
RNase_PH domain-containing protein.
    
  0.819
H2ZAC7_CIOSA
Nudix hydrolase domain-containing protein.
   
 0.767
H2ZFF2_CIOSA
PCRF domain-containing protein.
     
 0.725
H2Y940_CIOSA
Protein kinase domain-containing protein.
    
 0.704
H2ZGT7_CIOSA
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.704
H2ZAV9_CIOSA
14_3_3 domain-containing protein; Belongs to the 14-3-3 family.
   
  0.701
H2ZB59_CIOSA
14_3_3 domain-containing protein; Belongs to the 14-3-3 family.
   
  0.701
H2ZEP1_CIOSA
14_3_3 domain-containing protein; Belongs to the 14-3-3 family.
   
  0.701
H2ZFT0_CIOSA
14_3_3 domain-containing protein; Belongs to the 14-3-3 family.
   
  0.701
Your Current Organism:
Ciona savignyi
NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate
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