STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2Y7Y7_CIOSARING-type domain-containing protein. (159 aa)    
Predicted Functional Partners:
H2Y716_CIOSA
Uncharacterized protein.
   
 0.866
H2Z874_CIOSA
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.849
H2Z1B1_CIOSA
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.831
H2ZKW7_CIOSA
Uncharacterized protein; Belongs to the AAA ATPase family.
    
 0.828
H2ZNI4_CIOSA
Uncharacterized protein; Belongs to the AAA ATPase family.
    
 0.828
H2YDJ4_CIOSA
Uncharacterized protein.
    
 0.821
H2ZN73_CIOSA
Uncharacterized protein.
    
 0.821
H2Y9I4_CIOSA
AN1-type domain-containing protein.
    
 0.772
H2Z480_CIOSA
Uncharacterized protein.
    
 0.769
H2YAB2_CIOSA
Ubiquitin-like domain-containing protein.
    
 0.767
Your Current Organism:
Ciona savignyi
NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate
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