STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2Y810_CIOSAUncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (344 aa)    
Predicted Functional Partners:
H2YGU8_CIOSA
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
 
 0.654
H2ZB06_CIOSA
Neur_chan_LBD domain-containing protein.
  
 
 
 0.539
H2Y7S8_CIOSA
Neur_chan_LBD domain-containing protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
 
 
 0.515
H2Z977_CIOSA
Uncharacterized protein.
  
     0.510
H2Z910_CIOSA
Neur_chan_LBD domain-containing protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
     0.485
H2ZB98_CIOSA
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
  
     0.446
H2ZEN7_CIOSA
Uncharacterized protein.
  
 
 
 0.446
H2YVY4_CIOSA
Mab-21 domain-containing protein.
  
     0.428
Your Current Organism:
Ciona savignyi
NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.