Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H2Y816_CIOSAUncharacterized protein. (738 aa)    
Predicted Functional Partners:
H2Z899_CIOSA
Uncharacterized protein.
    
 0.997
H2ZQW6_CIOSA
14_3_3 domain-containing protein; Belongs to the 14-3-3 family.
    
 0.991
H2YDK0_CIOSA
Uncharacterized protein.
    
 0.990
H2YEM8_CIOSA
PH domain-containing protein.
    
 0.990
H2Z9Z6_CIOSA
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.988
H2Z5G0_CIOSA
Uncharacterized protein.
    
 0.987
H2YDE5_CIOSA
Protein kinase domain-containing protein.
    
 0.986
H2Z9D6_CIOSA
Uncharacterized protein; Belongs to the protein kinase superfamily.
   
 0.981
H2Y713_CIOSA
Uncharacterized protein.
    
 0.971
H2ZEY9_CIOSA
Uncharacterized protein.
    
 0.971
Your Current Organism:
Ciona savignyi
NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate
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