STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2Y8D5_CIOSAUncharacterized protein. (165 aa)    
Predicted Functional Partners:
H2ZBY8_CIOSA
Uncharacterized protein.
    
  0.790
H2YBQ8_CIOSA
Protein kinase domain-containing protein.
    
 0.760
H2YZP5_CIOSA
HDAC_interact domain-containing protein.
    
 0.741
H2YKL6_CIOSA
Uncharacterized protein.
   
 0.692
H2Z812_CIOSA
Uncharacterized protein.
    
 0.660
H2YHR2_CIOSA
Protein kinase domain-containing protein.
    
 0.647
H2YCY6_CIOSA
V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Belongs to the V-ATPase V0D/AC39 subunit family.
    
 0.614
H2ZJS1_CIOSA
Uncharacterized protein.
     
 0.613
H2ZEN6_CIOSA
Uncharacterized protein.
    
 0.611
H2Z5G6_CIOSA
Uncharacterized protein.
    
 0.599
Your Current Organism:
Ciona savignyi
NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate
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