STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cs-CKICasein kinase I; Belongs to the protein kinase superfamily. (341 aa)    
Predicted Functional Partners:
H2YLQ4_CIOSA
Uncharacterized protein.
   
 0.919
H2YF52_CIOSA
Uncharacterized protein.
    
 0.907
H2Z6Z9_CIOSA
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
  
 
0.856
H2YHR2_CIOSA
Protein kinase domain-containing protein.
    
 0.838
H2ZFA8_CIOSA
Uncharacterized protein.
    
 0.820
H2Z258_CIOSA
Uridine-cytidine kinase; Belongs to the uridine kinase family.
   
 0.788
H2Z968_CIOSA
PRK domain-containing protein.
   
 0.788
H2YAB2_CIOSA
Ubiquitin-like domain-containing protein.
    
  0.785
H2ZC51_CIOSA
Uncharacterized protein.
   
 0.766
H2YHW2_CIOSA
Uncharacterized protein; Belongs to the protein kinase superfamily.
     
 0.757
Your Current Organism:
Ciona savignyi
NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.