Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cs-CKICasein kinase I; Belongs to the protein kinase superfamily. (341 aa)    
Predicted Functional Partners:
H2YF52_CIOSA
Uncharacterized protein.
    
 0.981
H2YLQ4_CIOSA
Uncharacterized protein.
   
 0.973
H2Z6Z9_CIOSA
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
  0.955
H2YHR2_CIOSA
Protein kinase domain-containing protein.
    
 0.948
H2ZFA8_CIOSA
Uncharacterized protein.
    
 0.926
H2YHW2_CIOSA
Uncharacterized protein; Belongs to the protein kinase superfamily.
    
 0.863
H2YDD6_CIOSA
Uncharacterized protein.
    
 
 0.856
H2YV69_CIOSA
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 
  0.819
H2YCX8_CIOSA
G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.
     
 0.759
H2ZPA1_CIOSA
G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.
     
 0.759
Your Current Organism:
Ciona savignyi
NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate
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