STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2Y8Q1_CIOSAProtein kinase domain-containing protein; Belongs to the protein kinase superfamily. (463 aa)    
Predicted Functional Partners:
H2YCX3_CIOSA
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
   
 0.944
H2ZNI3_CIOSA
Uncharacterized protein.
   
 0.940
H2YT99_CIOSA
Uncharacterized protein.
   
 0.937
H2YYT6_CIOSA
Uncharacterized protein.
    
 0.937
H2YNJ2_CIOSA
Phosphatidylinositol 3-kinase catalytic subunit type 3.
 
  
 0.935
H2Z3A5_CIOSA
Uncharacterized protein.
    
 0.935
H2YL37_CIOSA
ATG11 domain-containing protein.
    
 0.897
H2ZM43_CIOSA
Uncharacterized protein.
    
 0.878
H2Y9G7_CIOSA
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.859
H2YMS1_CIOSA
Uncharacterized protein.
   
 0.838
Your Current Organism:
Ciona savignyi
NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate
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