Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H2Y8V3_CIOSAUncharacterized protein. (111 aa)    
Predicted Functional Partners:
H2YYR5_CIOSA
Tcp10_C domain-containing protein.
   
 0.985
H2Z6T1_CIOSA
Uncharacterized protein.
   
 
 0.985
Cs-Fgf9/16/20
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
    
 0.970
H2YNL4_CIOSA
Uncharacterized protein.
    
 0.948
H2ZB91_CIOSA
Uncharacterized protein; Belongs to the heparin-binding growth factors family.
    
 0.915
H2ZN91_CIOSA
Uncharacterized protein; Belongs to the heparin-binding growth factors family.
    
 0.901
H2ZE77_CIOSA
Uncharacterized protein.
    
 0.885
H2ZAQ3_CIOSA
IRS-type PTB domain-containing protein.
    
 0.870
H2Z035_CIOSA
WAP domain-containing protein.
    
 0.867
H2ZL28_CIOSA
Phosphoinositide phospholipase C.
    
 0.860
Your Current Organism:
Ciona savignyi
NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate
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