STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2Y8V4_CIOSASerine/threonine-protein kinase PLK. (549 aa)    
Predicted Functional Partners:
H2YPY4_CIOSA
Peptidase C50 domain-containing protein.
   
 0.968
H2Y8G5_CIOSA
Rad21_Rec8_N domain-containing protein.
   
 0.961
H2Z090_CIOSA
TPR_REGION domain-containing protein.
   
 0.960
H2Z766_CIOSA
RanBP2-type domain-containing protein.
   
 0.960
H2YW10_CIOSA
Structural maintenance of chromosomes protein.
   
 0.948
H2YY55_CIOSA
Wee1-like protein kinase.
   
0.944
H2ZC10_CIOSA
Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.
   
 0.940
H2YP82_CIOSA
Serine/threonine-protein phosphatase.
   
 0.937
H2YBC2_CIOSA
Rhodanese domain-containing protein.
   
 0.931
H2YVS1_CIOSA
WD_REPEATS_REGION domain-containing protein.
   
 0.919
Your Current Organism:
Ciona savignyi
NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.